vl::Molecule Member List

This is the complete list of members for vl::Molecule, including all inherited members.

actorToAtomMap() const	vl::Molecule	inline
actorToAtomMap()	vl::Molecule	inline
actorToBondMap() const	vl::Molecule	inline
actorToBondMap()	vl::Molecule	inline
actorTree() const	vl::Molecule	inline
actorTree()	vl::Molecule	inline
addAtom(Atom *atom)	vl::Molecule
addBond(Bond *bond)	vl::Molecule
addBond(Atom *a1, Atom *a2)	vl::Molecule
aromaticRingColor() const	vl::Molecule	inline
as()	vl::Object	inline
as() const	vl::Object	inline
atom(int index) const	vl::Molecule
atom(int index)	vl::Molecule
atomCount() const	vl::Molecule	inline
atomDetail() const	vl::Molecule	inline
atomLabelEffect() const	vl::Molecule	inline
atomLabelEffect()	vl::Molecule	inline
atomLabelTemplate() const	vl::Molecule	inline
atomLabelTemplate()	vl::Molecule	inline
atoms() const	vl::Molecule	inline
atoms()	vl::Molecule	inline
atomsStyle()	vl::Molecule	protected
atomToActorMap() const	vl::Molecule	inline
atomToActorMap()	vl::Molecule	inline
automaticDelete() const	vl::Object	inline
ballAndStickStyle()	vl::Molecule	protected
bond(int index) const	vl::Molecule
bond(int index)	vl::Molecule
bond(Atom *a1, Atom *a2) const	vl::Molecule
bond(Atom *a1, Atom *a2)	vl::Molecule
bondCount() const	vl::Molecule	inline
bondDetail() const	vl::Molecule	inline
bonds() const	vl::Molecule	inline
bonds()	vl::Molecule	inline
bondToActorMap() const	vl::Molecule	inline
bondToActorMap()	vl::Molecule	inline
computeAtomAdjacency()	vl::Molecule
cycle(int i) const	vl::Molecule	inline
cycle(int i)	vl::Molecule	inline
cycles() const	vl::Molecule	inline
cycles()	vl::Molecule	inline
decReference()	vl::Object	inline
eraseAllAtoms()	vl::Molecule
eraseAllBonds()	vl::Molecule
eraseAtom(Atom *atom)	vl::Molecule
eraseAtom(int index)	vl::Molecule
eraseBond(Bond *bond)	vl::Molecule
eraseBond(int bond)	vl::Molecule
eraseBond(Atom *a1, Atom *a2)	vl::Molecule
eraseBond(int a1, int a2)	vl::Molecule
generateAtomLabel(const Atom *atom, Transform *tr)	vl::Molecule	protected
generateAtomLabels()	vl::Molecule	protected
generateRings()	vl::Molecule	protected
id() const	vl::Molecule	inline
incidentBonds(std::vector< Bond *> &inc_bonds, Atom *atom)	vl::Molecule
incReference() const	vl::Object	inline
isActorToMoleculeMapEnabled() const	vl::Molecule	inline
isMoleculeToActorMapEnabled() const	vl::Molecule	inline
lineWidth() const	vl::Molecule	inline
mActorToAtomMap	vl::Molecule	protected
mActorToBondMap	vl::Molecule	protected
mActorToMoleculeMapEnabled	vl::Molecule	protected
mActorTree	vl::Molecule	protected
mAromaticRingColor	vl::Molecule	protected
mAtomDetail	vl::Molecule	protected
mAtomLabelEffect	vl::Molecule	protected
mAtomLabelTemplate	vl::Molecule	protected
mAtoms	vl::Molecule	protected
mAtomToActorMap	vl::Molecule	protected
mAutomaticDelete	vl::Object	protected
mBondDetail	vl::Molecule	protected
mBonds	vl::Molecule	protected
mBondToActorMap	vl::Molecule	protected
mCycles	vl::Molecule	protected
mId	vl::Molecule	protected
mLineWidth	vl::Molecule	protected
mMoleculeName	vl::Molecule	protected
mMoleculeStyle	vl::Molecule	protected
mMoleculeToActorMapEnabled	vl::Molecule	protected
mObjectName	vl::Object	protected
Molecule()	vl::Molecule
Molecule(const Molecule &other)	vl::Molecule	inline
moleculeName() const	vl::Molecule	inline
moleculeStyle() const	vl::Molecule	inline
mRefCountMutex	vl::Object	protected
mReferenceCount	vl::Object	mutableprotected
mRingOffset	vl::Molecule	protected
mShowAtomNames	vl::Molecule	protected
mSmoothLines	vl::Molecule	protected
mTags	vl::Molecule	protected
mTransformTree	vl::Molecule	protected
Object()	vl::Object	inline
Object(const Object &other)	vl::Object	inline
objectName() const	vl::Object	inline
operator=(const Molecule &other)	vl::Molecule
vl::Object::operator=(const Object &other)	vl::Object	inline
prepareAtomInsert(int bonus=100)	vl::Molecule	inlineprotected
prepareBondInsert(int bonus=100)	vl::Molecule	inlineprotected
prepareForRendering()	vl::Molecule
refCountMutex()	vl::Object	inline
refCountMutex() const	vl::Object	inline
referenceCount() const	vl::Object	inline
reset()	vl::Molecule
ringOffset() const	vl::Molecule	inline
setActorToMoleculeMapEnabled(bool enabled)	vl::Molecule	inline
setAromaticBondsColor(const fvec4 &color)	vl::Molecule
setAromaticRingColor(const fvec4 &color)	vl::Molecule	inline
setAtomColors(const fvec4 &color)	vl::Molecule
setAtomDetail(int detail)	vl::Molecule	inline
setAtomRadii(float radius)	vl::Molecule
setAtomTypeVisible(EAtomType type, bool visible)	vl::Molecule
setAutomaticDelete(bool autodel_on)	vl::Object	inline
setBondDetail(int detail)	vl::Molecule	inline
setBondRadii(float radius)	vl::Molecule
setCalculatedAtomRadii(float percentage=1.0f)	vl::Molecule
setCovalentAtomRadii(float percentage=1.0f)	vl::Molecule
setCPKAtomColors()	vl::Molecule
setEmpiricalAtomRadii(float percentage=1.0f)	vl::Molecule
setId(unsigned int id)	vl::Molecule	inline
setLineWidth(float w)	vl::Molecule	inline
setMoleculeName(const String &name)	vl::Molecule	inline
setMoleculeStyle(EMoleculeStyle style)	vl::Molecule	inline
setMoleculeToActorMapEnabled(bool enabled)	vl::Molecule	inline
setObjectName(const char *name)	vl::Object	inline
setObjectName(const std::string &name)	vl::Object	inline
setRefCountMutex(IMutex *mutex)	vl::Object	inline
setRingOffset(float offset)	vl::Molecule	inline
setShowAtomNames(bool show)	vl::Molecule	inline
setSmoothLines(bool smooth)	vl::Molecule	inline
setVanDerWaalsAtomRadii(float percentage=1.0f)	vl::Molecule
showAtomNames() const	vl::Molecule	inline
smoothLines() const	vl::Molecule	inline
sticksStyle()	vl::Molecule	protected
tags()	vl::Molecule	inline
tags() const	vl::Molecule	inline
transformTree()	vl::Molecule	inline
transformTree() const	vl::Molecule	inline
wireframeStyle()	vl::Molecule	protected
~Molecule()	vl::Molecule	inline
~Object()	vl::Object	protectedvirtual